In the next dialog you can pick which panels go where in your montage and how to merge channels using which colours. You can specify the number of grayscale (channel) panels and choose the number of merges. Select LabCode > Figure Maker > Make Montage To make a nicely spaced montage (row of images). This tool gives 400 x 400 pixel square ROI, right click to get a different size.

To do this select Click Square ROI from the > on the toolbar. Load in your multichannel image, adjust how you want and then crop to a square. There is a video explaining how to use the Figure Maker here. There are macros to help you to make figures with montages - made the way we like them! There are other plugins for making figures in ImageJ but none did what we wanted, so we made our own. If you want to install manually, add the contents of macros and scripts to the corresponding directories in your Fiji/ImageJ installation.Īfter installation, all macros can be found under the menu item called LabCode. This is the best way to install these macros and maintain the latest versions. Instructions for how to follow a 3rd party update site are here. Most of these tools are available via the quantixed ImageJ update site. Some simple macros for Fiji/ImageJ that we are using in the lab.

Zoom movie training montage